io¶
High level Structure and Trajectory I/O. HDF5 convenience IO functions.
Convert a string or number to a floating point number, if possible. |
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Factory class to construct callables to parse files. |
Convert a string or number to a floating point number, if possible. |
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Alias for |
Read Cif files. |
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Read CP2K MD run ouput (all text). |
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Read CP2K MD run ouput (coordinates in dcd binary format). |
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Read CP2K relaxation run ouput (all text). |
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Read CP2K SCF (single point) run ouput. |
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Read CPMD MD (fixed and variable cell, BO and CP) run ouput. |
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Read CPMD SCF (single point) run ouput. |
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Read h5 file into dict. |
Read LAMMPS MD run ouput (coordinates in dcd format). |
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Read LAMMPS MD run ouput (all text). |
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Read PDB files. |
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Load object written by |
Read Pwscf md/relax/vc-relax run ouput. |
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Read Pwscf SCF run ouput. |
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Read Pwscf vc-md run ouput. |
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Generate input for WIEN2K's |
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Write animated XSF file for Structure (only 1 step) or Trajectory. |
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Q'n'D Cif writer. |
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Write dictionary with arrays (or whatever HDF5 handles) to h5 file. |
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Write Structure object to lammps format. |
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Write struct to input file for WIEN2K's |
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Write VMD-style [VMD] XYZ file. |